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Table 1 Primer sequences used for qRT-PCR

From: Dynamic RNA profiles in the small intestinal epithelia of cats after Toxoplasma gondii infection

NCBI accession number

Primer F

Primer R

Gene name or Remark

LncRNA

   

 XLOC_122170

GAGAGAGAGGGAGACACAGAAT

GGTTAAGCGTCCGACTTCAG

 

 XLOC_021327

AGGGAAGTCTGCCACTATCT

GTTCACCATCGGCAAAGAATG

 

 XLOC_122162

GACGTGTGCGTGTCCTC

GAGCGTGACGGACTGAC

 

 XLOC_433161

AGGCGATTGATCGGCAAG

AGGACACATTGATCATCGACAC

 

 XLOC_119975

CATAGAAGCGGGAGCTATGTT

CTCCAGTGAACCCACTGAC

 

 XLOC_494167

ATGGAATCGGAGTCAGTGTTG

GAGTCTTTCTGGCCCTGTATG

 

 XLOC_123143

AGACGGGCATTGTCAATCTG

CAGCCACTACTTCAAGACCATC

 

 XLOC_429073

TCTCACGTCACTCAGGATCT

GAAGAATCACGAGGAGGAAGTC

 

mRNA

   

 ENSFCAG00000030029

CCTTCTCACCCTTACGTTCATC

CAACTGCTAGTACCCTCCATAAC

 

 ENSFCAG00000025949

CCGTAAGCCCTTGGTCATAAT

TTGACGGCTACAACCTGAAG

HSPD1

 ENSFCAG00000042651

GCCAGGACTTGGTCCTATTAAG

TACCACGACCGTAGGAGTTAG

KRT19

 ENSFCAG00000040725

GAAGGAGCTGAAGGAGCTTATC

TTGTTCCGGTCAAGGTCATC

S100A6

 ENSFCAG00000006483

TACCTCTACCTGTCCTCTTGAC

CTTCCTCCTCCTCCTCCTTATT

PIGR

 ENSFCAG00000013378

TTTCCTACTGCCCTGGAATG

CGTACACGAAGATGAGAAGAGAG

ATP1A1

 ENSFCAG00000013165

CTTTGACCGTGTGCCTAGTT

GAGGTTGCTCACCTGGTTTAT

PAPSS2

 ENSFCAG00000027930

CATCATCTGCTCCGTGATCTT

TGTCATTGATGAGGCGGATAAT

CYP2F1

 ENSFCAG00000005165

CCAGAGGGAAGGTTTAGGTATG

CCCTGTCCTCATTTCCTTTCT

PLB1

 ENSFCAG00000003788

TCACCCACAGCTGCAATAC

GTTCATCTCCTTCACCACACTC

DPEP1

 ENSFCAG00000036330

GTTCACCATCGGCAAAGAATG

AGGGAAGTCTGCCACTATCT

FABP6

CircRNA

   

 novel_circ_0008741

TGGATGAGCCAATTTCCAGTCA

TGGATGAGCCAATTTCCAGTCA

 

 novel_circ_0010073

TTCTTGGAGGTGTGGGGTGT

TTGGATGCTCACGTCTTCTGA

 

 novel_circ_0009117

TCTGCATTGAACTGTTTTGTCTGT

AGCCTCATCATCACTTGCATCT

 

 novel_circ_0017780

TGCCGAGCAATTGTGATGAG

TAGTGAGGCAGTCCAGTTGC

 

 novel_circ_0002377

CTACATGGGAGGTGCACGAG

CTACATGGGAGGTGCACGAG

 

 novel_circ_0006332

TCACAATGGATACAGAGTCGAGTG

TAATCTGTACCTCACCTTCTTTGC

 

 novel_circ_0005080

AGCTGGAGACAAGGAAGTTGT

CTGCATGGCTGTACGGTCTAC

 

 novel_circ_0019348

CGCTACACCCTCAAGACCG

CACGGGCACAATCGTCATGG

 

 novel_circ_0004720

AATTCCCAAGCCAGAGCCTC

CAAGCACTGCCACTCCTCCT

 

 AB051104.1

GACCACCTTCAACTCCATCAT

GATCTCCTTCTGCATCCTGTC

Felis catus β-actin

  1. qRT-PCR: Quantitative reverse transcription PCR; lncRNA: Long non-coding RNA; CircRNA: Circular RNA; mRNA: Messenger RNA