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Table 1 Primers used in this study

From: Identification of tick-borne pathogen diversity by metagenomic analysis in Haemaphysalis longicornis from Xinyang, China

Target

Gene

Primer

Primer name

Anaplasma

16S rRNA

Out1

TTGAGAGTTTGATCCTGGCTCAGAACG

Out2(21)

CACCTCTACACTAGGAATTCCGCTATC

Out2F

GATAGCGGAATTCCTAGTGTAGAGGTG

317Pan(20)

AAAGGAGGTAATCCAGC

Rickettsia

gltA

CS2d

ATGACCAATGAAAATAATAAT

CSEndr

CTTATACTCTCTATGTACA

RpCS877F

GGGGACCTGCTCACGGCGG

RpCS1258R(20)

ATTGCAAAAAGTACAGTGAACA

Coxiella

transposase

Cox_trans-3

GTAACGATGCGCAGGCGAT

Cox_trans-4(23)

CCACCGCTTCGCTCGCTA

Babesia

18S rDNA

Piro0F

GCCAGTAGTCATATGCTTGTGTTA

Piro1F

CCATGCATGTCTWAGTAYAARCTTTTA

Piro5.5R

CCTYTAAGTGATAAGGTTCACAAAACTT

Piro6R(22)

CTCCTTCCTYTAAGTGATAAGGTTCAC

SFTSV

S segment

BNYS1-F

TCTTCTCCATCAAGAACAGC

BNYS1-R(24)

TTCGACAAAATTAGACCTCC