Targeted gene | Primer sequence (5′ → 3′) | Reaction component | Cycling condition | LOD (ng/µl) |
---|---|---|---|---|
pfhrp2 Exon 1–2, PF3D7_0831800 | Outer For: GGTTTCCTTCTCAAAAAATAAAG Rev: TCTACATGTGCTTGAGTTTCG | One Taq 2 × Master Mix with standard buffer: 12.5 µl 10 µmol/L forward primer: 1 µl 10 µmol/L reverse primer: 1 µl Nuclease free water: 7.5 µl DNA template: 3 µl (gDNA or 5 × diluted outer PCR product 25 µl reaction volume | 95 °C/5 min; 40 cycles of 95 °C/30 s, 55 °C/30 s, 68 °C/30 s 68 °C/5 min 4 °C–∞ | 10–5 |
Inner For: GTATTATCCGCTGCCGTTTTTGCC Rev: CTACACAAGTTATTATTAAATGCGGAA | 95 °C/5 min; 40 cycles of 95 °C/30 s, 62 °C/30 s, 68 °C/30 s 68 °C/5 min 4 °C–∞ | |||
pfldh (qPCR) | For: ACGATTTGGCTGGAGCAG Rev: GGAACACCTGAATGTTGATG | PowerUp™ SYBR ™ Green Master Mix (2 ×): 12.5 µl 10 µmol/L forward primer: 0.5 µl 10 µmol/L reverse primer: 0.5 µl Nuclease free water: 6.5 µl DNA template: 2–4 µl 22–24 µl reaction volume | 50 °C/2 min; 95 °C/2 min 45 cycles of 95 °C/15 s, 62 °C/1 min, 95 °C/30 s, 60 °C/15 s | 10–4 |